fix: daemon lifecycle cleanup and error logging improvements

- Refactor HealthDaemon to use a tracked session (AbortController + awaitable
  promise) instead of fire-and-forget health check loops, preventing health
  checks from running after a service is stopped
- Stop health checks before terminating daemon to avoid false crash reports
  during intentional shutdown
- Guard onExit callbacks with AbortSignal to prevent stale session callbacks
- Add logErrorOnce utility to deduplicate repeated error logging
- Fix SystemForEmbassy.stop() to capture clean promise before deleting ref
- Treat SIGTERM (signal 15) as successful exit in subcontainer sync
- Fix asError to return original Error instead of wrapping in new Error
- Remove unused ExtendedVersion import from Backups.ts

container-runtime/package-lock.json

@@ -37,7 +37,7 @@
     },
     "../sdk/dist": {
       "name": "@start9labs/start-sdk",
-      "version": "0.4.0-beta.61",
+      "version": "0.4.0-beta.62",
       "license": "MIT",
       "dependencies": {
         "@iarna/toml": "^3.0.0",

container-runtime/src/Adapters/Systems/SystemForEmbassy/index.ts

@@ -445,15 +445,14 @@ export class SystemForEmbassy implements System {
   }
   callCallback(_callback: number, _args: any[]): void {}
   async stop(): Promise<void> {
-    const { currentRunning } = this
+    const clean = this.currentRunning?.clean({
-    this.currentRunning?.clean()
-    delete this.currentRunning
-    if (currentRunning) {
-      await currentRunning.clean({
       timeout: fromDuration(
         (this.manifest.main["sigterm-timeout"] as any) || "30s",
       ),
     })
+    delete this.currentRunning
+    if (clean) {
+      await clean
     }
   }
 

core/src/service/effects/subcontainer/sync.rs

@@ -768,7 +768,7 @@ pub fn exec(
         stderr_thread.map(|t| t.join().unwrap());
         if let Some(code) = exit.code() {
             std::process::exit(code);
-        } else if exit.success() {
+        } else if exit.success() || exit.signal() == Some(15) {
             Ok(())
         } else {
             Err(Error::new(

sdk/base/lib/util/asError.ts

@@ -8,7 +8,7 @@
  */
 export const asError = (e: unknown) => {
   if (e instanceof Error) {
-    return new Error(e as any)
+    return e
   }
   if (typeof e === 'string') {
     return new Error(`${e}`)

sdk/base/lib/util/index.ts

@@ -32,3 +32,4 @@ export { deepEqual } from './deepEqual'
 export { AbortedError } from './AbortedError'
 export * as regexes from './regexes'
 export { stringFromStdErrOut } from './stringFromStdErrOut'
+export { logErrorOnce } from './logErrorOnce'

sdk/base/lib/util/logErrorOnce.ts

@@ -0,0 +1,9 @@
+const loggedErrors = new WeakSet<object>()
+
+export function logErrorOnce(err: unknown) {
+  if (typeof err === 'object' && err !== null) {
+    if (loggedErrors.has(err)) return
+    loggedErrors.add(err)
+  }
+  console.error(err)
+}

sdk/package/lib/backup/Backups.ts

@@ -2,7 +2,6 @@ import * as T from '../../../base/lib/types'
 import * as child_process from 'child_process'
 import * as fs from 'fs/promises'
 import { Affine, asError } from '../util'
-import { ExtendedVersion, VersionRange } from '../../../base/lib'
 import { InitKind, InitScript } from '../../../base/lib/inits'
 
 /** Default rsync options used for backup and restore operations */

sdk/package/lib/mainFn/CommandController.ts

@@ -7,6 +7,7 @@ import { Drop, splitCommand } from '../util'
 import * as cp from 'child_process'
 import * as fs from 'node:fs/promises'
 import { DaemonCommandType, ExecCommandOptions, ExecFnOptions } from './Daemons'
+import { logErrorOnce } from '../../../base/lib/util/logErrorOnce'
 
 /**
  * Low-level controller for a single running process inside a subcontainer (or as a JS function).
@@ -220,6 +221,6 @@ export class CommandController<
     }
   }
   onDrop(): void {
-    this.term().catch(console.error)
+    this.term().catch(logErrorOnce)
   }
 }

sdk/package/lib/mainFn/Daemon.ts

@@ -1,5 +1,6 @@
 import * as T from '../../../base/lib/types'
 import { asError } from '../../../base/lib/util/asError'
+import { logErrorOnce } from '../../../base/lib/util/logErrorOnce'
 import { Drop } from '../util'
 import {
   SubContainer,
@@ -64,7 +65,7 @@ export class Daemon<
         )
       const res = new Daemon(subc, startCommand)
       effects.onLeaveContext(() => {
-        res.term({ destroySubcontainer: true }).catch((e) => console.error(e))
+        res.term({ destroySubcontainer: true }).catch((e) => logErrorOnce(e))
       })
       return res
     }
@@ -86,7 +87,7 @@ export class Daemon<
         if (this.commandController)
           await this.commandController
             .term({})
-            .catch((err) => console.error(err))
+            .catch((err) => logErrorOnce(err))
         try {
           this.commandController = await this.startCommand()
           if (!this.shouldBeRunning) {
@@ -97,7 +98,7 @@ export class Daemon<
           const success = await this.commandController.wait().then(
             (_) => true,
             (err) => {
-              console.error(err)
+              if (this.shouldBeRunning) logErrorOnce(err)
               return false
             },
           )
@@ -147,7 +148,7 @@ export class Daemon<
       this.onExitFns = []
     }
     if (this.exiting) {
-      await this.exiting.catch(console.error)
+      await this.exiting.catch(logErrorOnce)
       if (termOptions?.destroySubcontainer) {
         await this.subcontainer?.destroy()
       }
@@ -172,6 +173,6 @@ export class Daemon<
     this.onExitFns.push(fn)
   }
   onDrop(): void {
-    this.term().catch((e) => console.error(asError(e)))
+    this.term().catch((e) => logErrorOnce(asError(e)))
   }
 }

sdk/package/lib/mainFn/HealthDaemon.ts

@@ -4,14 +4,6 @@ import { Ready } from './Daemons'
 import { Daemon } from './Daemon'
 import { SetHealth, Effects, SDKManifest } from '../../../base/lib/types'
 
-const oncePromise = <T>() => {
-  let resolve: (value: T) => void
-  const promise = new Promise<T>((res) => {
-    resolve = res
-  })
-  return { resolve: resolve!, promise }
-}
-
 export const EXIT_SUCCESS = 'EXIT_SUCCESS' as const
 
 /**
@@ -29,6 +21,7 @@ export class HealthDaemon<Manifest extends SDKManifest> {
   private resolveReady: (() => void) | undefined
   private resolvedReady: boolean = false
   private readyPromise: Promise<void>
+  private session: { abort: AbortController; done: Promise<void> } | null = null
   constructor(
     readonly daemon: Daemon<Manifest> | null,
     readonly dependencies: HealthDaemon<Manifest>[],
@@ -54,7 +47,7 @@ export class HealthDaemon<Manifest extends SDKManifest> {
   }) {
     this.healthWatchers = []
     this.running = false
-    this.healthCheckCleanup?.()
+    await this.stopSession()
 
     await this.daemon?.term({
       ...termOptions,
@@ -77,20 +70,25 @@ export class HealthDaemon<Manifest extends SDKManifest> {
 
     if (newStatus) {
       console.debug(`Launching ${this.id}...`)
-      this.setupHealthCheck()
+      this.startSession()
       this.daemon?.start()
       this.started = performance.now()
     } else {
       console.debug(`Stopping ${this.id}...`)
-      this.daemon?.term()
+      await this.stopSession()
-      await this.turnOffHealthCheck()
+      await this.daemon?.term()
     }
   }
 
-  private healthCheckCleanup: (() => Promise<null>) | null = null
+  private async stopSession() {
-  private async turnOffHealthCheck() {
+    if (!this.session) return
-    await this.healthCheckCleanup?.()
+    this.session.abort.abort()
+    await this.session.done
+    this.session = null
+    this.resetReady()
+  }
 
+  private resetReady() {
     this.resolvedReady = false
     this.readyPromise = new Promise(
       (resolve) =>
@@ -100,8 +98,14 @@ export class HealthDaemon<Manifest extends SDKManifest> {
         }),
     )
   }
-  private async setupHealthCheck() {
+
+  private startSession() {
+    this.session?.abort.abort()
+
+    const abort = new AbortController()
+
     this.daemon?.onExit((success) => {
+      if (abort.signal.aborted) return
       if (success && this.ready === 'EXIT_SUCCESS') {
         this.setHealth({ result: 'success', message: null })
       } else if (!success) {
@@ -116,42 +120,49 @@ export class HealthDaemon<Manifest extends SDKManifest> {
         })
       }
     })
+
+    const done =
+      this.ready === 'EXIT_SUCCESS'
+        ? Promise.resolve()
+        : this.runHealthCheckLoop(abort.signal)
+
+    this.session = { abort, done }
+  }
+
+  private async runHealthCheckLoop(signal: AbortSignal): Promise<void> {
     if (this.ready === 'EXIT_SUCCESS') return
-    if (this.healthCheckCleanup) return
     const trigger = (this.ready.trigger ?? defaultTrigger)(() => ({
       lastResult: this._health.result,
     }))
 
-    const { promise: status, resolve: setStatus } = oncePromise<{
+    const aborted = new Promise<{ done: true }>((resolve) =>
-      done: true
+      signal.addEventListener('abort', () => resolve({ done: true }), {
-    }>()
+        once: true,
-    const { promise: exited, resolve: setExited } = oncePromise<null>()
+      }),
-    new Promise(async () => {
+    )
-      if (this.ready === 'EXIT_SUCCESS') return
+
+    try {
       for (
-        let res = await Promise.race([status, trigger.next()]);
+        let res = await Promise.race([aborted, trigger.next()]);
         !res.done;
-        res = await Promise.race([status, trigger.next()])
+        res = await Promise.race([aborted, trigger.next()])
       ) {
         const response: HealthCheckResult = await Promise.resolve(
           this.ready.fn(),
         ).catch((err) => {
           return {
-            result: 'failure',
+            result: 'failure' as const,
             message: 'message' in err ? err.message : String(err),
           }
         })
 
+        if (signal.aborted) break
         await this.setHealth(response)
       }
-      setExited(null)
+    } catch (err) {
-    }).catch((err) => console.error(`Daemon ${this.id} failed: ${err}`))
+      if (!signal.aborted) {
-
+        console.error(`Daemon ${this.id} health check failed: ${err}`)
-    this.healthCheckCleanup = async () => {
+      }
-      setStatus({ done: true })
-      await exited
-      this.healthCheckCleanup = null
-      return null
     }
   }